get_3dstats

obtain summary metrics of data file from discrete segmentation. summary metrics include non-zero voxels, min, max, median, mean

Usage

get_3dstats(in_data, in_dseg, in_lut = NULL, out_path, overwrite = FALSE)

Arguments

in_data

input path to data nifti file

in_dseg

input path to discrete segmentation nifti file

in_lut

input path to look up table

out_path

output path to save stats tsv file

overwrite

flag to overwrite (default: 0)

Value

A data.frame of regional 3D summary statistics; optionally writes it to out_path.

See also

Other neuroimaging helpers: compare_brains(), convet_lut_fs2bids(), extract_brain_slice(), plot_brain(), plot_brain_slice(), split_dseg2mask()